Welcome to Structure Surfer!

Structure Surfer is a browsable database of RNA secondary structure data. Check out the FAQ for tips on searching for structures and interpreting the results, or just dive right in.

You can browse by coordinate in RNA Structure tab. We also recommend a data aggregation approach if you have many features with similar structure (i.e. predicted hairpins, protein binding sites, etc.)

To get started, click on the 'RNA Structure' tab, or 'Aggregate Mode' tab. Sample bed files can be found in the Downloads section.